#include <rtkWarpSequenceImageFilter.h>

Inheritance diagram for rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >:

Collaboration diagram for rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >:

Public Types
using	CastFilterType = itk::CastImageFilter< TImage, TImageSequence >

using	ConstantImageSourceType = rtk::ConstantImageSource< TImageSequence >

using	CPUImageType = typename itk::Image< typename TImage::PixelType, TImage::ImageDimension >

using	CPUWarpFilterType = typename itk::WarpImageFilter< TImage, TImage, TDVFImage >

using	CudaCyclicDeformationImageFilterType = CyclicDeformationImageFilter< TDVFImageSequence, TDVFImage >

using	DVFInterpolatorType = rtk::CyclicDeformationImageFilter< TDVFImageSequence, TDVFImage >

using	ExtractFilterType = itk::ExtractImageFilter< TImageSequence, TImage >

using	ForwardWarpFilterType = ForwardWarpImageFilter< TImage, TImage, TDVFImage >

using	LinearInterpolatorType = itk::LinearInterpolateImageFunction< TImage, double >

using	NearestNeighborInterpolatorType = itk::NearestNeighborInterpolateImageFunction< TImage, double >

using	PasteFilterType = itk::PasteImageFilter< TImageSequence, TImageSequence >

using	Pointer = itk::SmartPointer< Self >

using	Self = WarpSequenceImageFilter

using	Superclass = itk::ImageToImageFilter< TImageSequence, TImageSequence >

using	WarpFilterType = CPUWarpFilterType

Public Member Functions
virtual ::itk::LightObject::Pointer	CreateAnother () const

TDVFImageSequence::Pointer	GetDisplacementField ()

void	SetDisplacementField (const TDVFImageSequence *DVFs)


virtual const char *	GetNameOfClass () const


virtual bool	GetForwardWarp ()

virtual void	SetForwardWarp (bool _arg)


virtual void	SetPhaseShift (float _arg)

virtual float	GetPhaseShift ()


virtual void	SetUseNearestNeighborInterpolationInWarping (bool _arg)

virtual bool	GetUseNearestNeighborInterpolationInWarping ()


virtual void	SetUseCudaCyclicDeformation (bool _arg)

virtual bool	GetUseCudaCyclicDeformation ()

Static Public Member Functions
static Pointer	New ()

Protected Member Functions
void	GenerateData () override

void	VerifyInputInformation () const override

	WarpSequenceImageFilter ()

	~WarpSequenceImageFilter () override=default


void	GenerateOutputInformation () override

void	GenerateInputRequestedRegion () override

Protected Attributes
CastFilterType::Pointer	m_CastFilter

ConstantImageSourceType::Pointer	m_ConstantSource

DVFInterpolatorType::Pointer	m_DVFInterpolatorFilter

TImageSequence::RegionType	m_ExtractAndPasteRegion

ExtractFilterType::Pointer	m_ExtractFilter

bool	m_ForwardWarp

PasteFilterType::Pointer	m_PasteFilter

float	m_PhaseShift

bool	m_UseCudaCyclicDeformation

bool	m_UseNearestNeighborInterpolationInWarping

CPUWarpFilterType::Pointer	m_WarpFilter

Detailed Description

template<typename TImageSequence, typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>
class rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >

Applies an N-D + time Motion Vector Field to an N-D + time sequence of images.

Most of the work in this filter is performed by the underlying itkWarpImageFilter. The only difference is that this filter manages the last dimension specifically as time.

Test:: rtkfourdroostertest.cxx

Author: Cyril Mory

Definition at line 97 of file rtkWarpSequenceImageFilter.h.

Member Typedef Documentation

◆ CastFilterType

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

using rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::CastFilterType = itk::CastImageFilter<TImage, TImageSequence>

Definition at line 171 of file rtkWarpSequenceImageFilter.h.

◆ ConstantImageSourceType

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

using rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::ConstantImageSourceType = rtk::ConstantImageSource<TImageSequence>

Definition at line 172 of file rtkWarpSequenceImageFilter.h.

◆ CPUImageType

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

using rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::CPUImageType = typename itk::Image<typename TImage::PixelType, TImage::ImageDimension>

SFINAE type alias, depending on whether a CUDA image is used.

Definition at line 111 of file rtkWarpSequenceImageFilter.h.

◆ CPUWarpFilterType

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

using rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::CPUWarpFilterType = typename itk::WarpImageFilter<TImage, TImage, TDVFImage>

Definition at line 112 of file rtkWarpSequenceImageFilter.h.

◆ CudaCyclicDeformationImageFilterType

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

using rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::CudaCyclicDeformationImageFilterType = CyclicDeformationImageFilter<TDVFImageSequence, TDVFImage>

Definition at line 126 of file rtkWarpSequenceImageFilter.h.

◆ DVFInterpolatorType

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

using rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::DVFInterpolatorType = rtk::CyclicDeformationImageFilter<TDVFImageSequence, TDVFImage>

Definition at line 169 of file rtkWarpSequenceImageFilter.h.

◆ ExtractFilterType

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

using rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::ExtractFilterType = itk::ExtractImageFilter<TImageSequence, TImage>

Definition at line 168 of file rtkWarpSequenceImageFilter.h.

◆ ForwardWarpFilterType

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

using rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::ForwardWarpFilterType = ForwardWarpImageFilter<TImage, TImage, TDVFImage>

Definition at line 125 of file rtkWarpSequenceImageFilter.h.

◆ LinearInterpolatorType

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

using rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::LinearInterpolatorType = itk::LinearInterpolateImageFunction<TImage, double>

Typedefs of internal filters

Definition at line 166 of file rtkWarpSequenceImageFilter.h.

◆ NearestNeighborInterpolatorType

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

using rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::NearestNeighborInterpolatorType = itk::NearestNeighborInterpolateImageFunction<TImage, double>

Definition at line 167 of file rtkWarpSequenceImageFilter.h.

◆ PasteFilterType

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

using rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::PasteFilterType = itk::PasteImageFilter<TImageSequence, TImageSequence>

Definition at line 170 of file rtkWarpSequenceImageFilter.h.

◆ Pointer

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

using rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::Pointer = itk::SmartPointer<Self>

Definition at line 105 of file rtkWarpSequenceImageFilter.h.

◆ Self

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

using rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::Self = WarpSequenceImageFilter

Standard class type alias.

Definition at line 103 of file rtkWarpSequenceImageFilter.h.

◆ Superclass

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

using rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::Superclass = itk::ImageToImageFilter<TImageSequence, TImageSequence>

Definition at line 104 of file rtkWarpSequenceImageFilter.h.

◆ WarpFilterType

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

using rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::WarpFilterType = CPUWarpFilterType

Definition at line 124 of file rtkWarpSequenceImageFilter.h.

Constructor & Destructor Documentation

◆ WarpSequenceImageFilter()

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::WarpSequenceImageFilter ( )

protected

◆ ~WarpSequenceImageFilter()

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::~WarpSequenceImageFilter ( )

overrideprotecteddefault

Member Function Documentation

◆ CreateAnother()

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

virtual::itk::LightObject::Pointer rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::CreateAnother ( ) const

virtual

Reimplemented from itk::Object.

◆ GenerateData()

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

void rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::GenerateData ( )

overrideprotectedvirtual

Does the real work.

Reimplemented from itk::ImageSource< TOutputImage >.

◆ GenerateInputRequestedRegion()

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

void rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::GenerateInputRequestedRegion ( )

overrideprotectedvirtual

The volume and the projections must have different requested regions

Reimplemented from itk::ProcessObject.

◆ GenerateOutputInformation()

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

void rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::GenerateOutputInformation ( )

overrideprotectedvirtual

The volume and the projections must have different requested regions

Reimplemented from itk::ProcessObject.

◆ GetDisplacementField()

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

TDVFImageSequence::Pointer rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::GetDisplacementField ( )

Get the motion vector field used in input 1

◆ GetForwardWarp()

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

virtual bool rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::GetForwardWarp ( )

virtual

Set/Get for m_ForwardWarp

◆ GetNameOfClass()

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

virtual const char* rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::GetNameOfClass ( ) const

virtual

Run-time type information (and related methods).

Reimplemented from itk::ImageSource< TOutputImage >.

◆ GetPhaseShift()

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

virtual float rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::GetPhaseShift ( )

virtual

Phase shift to simulate phase estimation errors

◆ GetUseCudaCyclicDeformation()

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

virtual bool rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::GetUseCudaCyclicDeformation ( )

virtual

Set and Get for the UseCudaCyclicDeformation variable

◆ GetUseNearestNeighborInterpolationInWarping()

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

virtual bool rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::GetUseNearestNeighborInterpolationInWarping ( )

virtual

Information for the CUDA warp filter, to avoid using RTTI

◆ New()

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

static Pointer rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::New ( )

static

Method for creation through the object factory.

◆ SetDisplacementField()

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

void rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::SetDisplacementField ( const TDVFImageSequence * DVFs )

Set the motion vector field used in input 1

◆ SetForwardWarp()

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

virtual void rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::SetForwardWarp ( bool _arg )

virtual

Set/Get for m_ForwardWarp

◆ SetPhaseShift()

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

virtual void rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::SetPhaseShift ( float _arg )

virtual

Phase shift to simulate phase estimation errors

◆ SetUseCudaCyclicDeformation()

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

virtual void rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::SetUseCudaCyclicDeformation ( bool _arg )

virtual

Set and Get for the UseCudaCyclicDeformation variable

◆ SetUseNearestNeighborInterpolationInWarping()

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

virtual void rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::SetUseNearestNeighborInterpolationInWarping ( bool _arg )

virtual

Information for the CUDA warp filter, to avoid using RTTI

◆ VerifyInputInformation()

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

void rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::VerifyInputInformation ( ) const

inlineoverrideprotected

The inputs of this filter have the same type (float, 3) but not the same meaning It is normal that they do not occupy the same physical space. Therefore this check must be removed

Definition at line 201 of file rtkWarpSequenceImageFilter.h.

Member Data Documentation

◆ m_CastFilter

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

CastFilterType::Pointer rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::m_CastFilter

protected

Definition at line 187 of file rtkWarpSequenceImageFilter.h.

◆ m_ConstantSource

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

ConstantImageSourceType::Pointer rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::m_ConstantSource

protected

Definition at line 188 of file rtkWarpSequenceImageFilter.h.

◆ m_DVFInterpolatorFilter

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

DVFInterpolatorType::Pointer rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::m_DVFInterpolatorFilter

protected

Definition at line 185 of file rtkWarpSequenceImageFilter.h.

◆ m_ExtractAndPasteRegion

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

TImageSequence::RegionType rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::m_ExtractAndPasteRegion

protected

Extraction regions for both extract filters

Definition at line 191 of file rtkWarpSequenceImageFilter.h.

◆ m_ExtractFilter

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

ExtractFilterType::Pointer rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::m_ExtractFilter

protected

Definition at line 184 of file rtkWarpSequenceImageFilter.h.

◆ m_ForwardWarp

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

bool rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::m_ForwardWarp

protected

Perform a forward warping (using splat) instead of the standard backward warping

Definition at line 194 of file rtkWarpSequenceImageFilter.h.

◆ m_PasteFilter

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

PasteFilterType::Pointer rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::m_PasteFilter

protected

Definition at line 186 of file rtkWarpSequenceImageFilter.h.

◆ m_PhaseShift

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

float rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::m_PhaseShift

protected

Definition at line 195 of file rtkWarpSequenceImageFilter.h.

◆ m_UseCudaCyclicDeformation

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

bool rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::m_UseCudaCyclicDeformation

protected

Definition at line 213 of file rtkWarpSequenceImageFilter.h.

◆ m_UseNearestNeighborInterpolationInWarping

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

bool rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::m_UseNearestNeighborInterpolationInWarping

protected

Definition at line 212 of file rtkWarpSequenceImageFilter.h.

◆ m_WarpFilter

template<typename TImageSequence , typename TDVFImageSequence = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension>, typename TImage = itk::Image<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, typename TDVFImage = itk::Image<itk::CovariantVector<typename TImageSequence::ValueType, TImageSequence::ImageDimension - 1>, TImageSequence::ImageDimension - 1>>

CPUWarpFilterType::Pointer rtk::WarpSequenceImageFilter< TImageSequence, TDVFImageSequence, TImage, TDVFImage >::m_WarpFilter

protected

Member pointers to the filters used internally (for convenience)

Definition at line 183 of file rtkWarpSequenceImageFilter.h.

The documentation for this class was generated from the following file:

rtkWarpSequenceImageFilter.h

Public Types

Public Member Functions

Static Public Member Functions

Protected Member Functions

Protected Attributes

Detailed Description

Member Typedef Documentation

◆ CastFilterType

◆ ConstantImageSourceType

◆ CPUImageType

◆ CPUWarpFilterType

◆ CudaCyclicDeformationImageFilterType

◆ DVFInterpolatorType

◆ ExtractFilterType

◆ ForwardWarpFilterType

◆ LinearInterpolatorType

◆ NearestNeighborInterpolatorType

◆ PasteFilterType

◆ Pointer

◆ Self

◆ Superclass

◆ WarpFilterType

Constructor & Destructor Documentation

◆ WarpSequenceImageFilter()

◆ ~WarpSequenceImageFilter()

Member Function Documentation

◆ CreateAnother()

◆ GenerateData()

◆ GenerateInputRequestedRegion()

◆ GenerateOutputInformation()

◆ GetDisplacementField()

◆ GetForwardWarp()

◆ GetNameOfClass()

◆ GetPhaseShift()

◆ GetUseCudaCyclicDeformation()

◆ GetUseNearestNeighborInterpolationInWarping()

◆ New()

◆ SetDisplacementField()

◆ SetForwardWarp()

◆ SetPhaseShift()

◆ SetUseCudaCyclicDeformation()

◆ SetUseNearestNeighborInterpolationInWarping()

◆ VerifyInputInformation()

Member Data Documentation

◆ m_CastFilter

◆ m_ConstantSource

◆ m_DVFInterpolatorFilter

◆ m_ExtractAndPasteRegion

◆ m_ExtractFilter

◆ m_ForwardWarp

◆ m_PasteFilter

◆ m_PhaseShift

◆ m_UseCudaCyclicDeformation

◆ m_UseNearestNeighborInterpolationInWarping

◆ m_WarpFilter