RTK  1.4.0
Reconstruction Toolkit
Namespaces | Classes | Functions
rtk Namespace Reference

Namespaces

 Function
 
 Functor
 

Classes

class  AdditiveGaussianNoiseImageFilter
 
class  AddMatrixAndDiagonalImageFilter
 
class  ADMMTotalVariationConeBeamReconstructionFilter
 
class  ADMMTotalVariationConjugateGradientOperator
 
class  ADMMWaveletsConeBeamReconstructionFilter
 
class  ADMMWaveletsConjugateGradientOperator
 
class  AmsterdamShroudImageFilter
 
class  args_info_manager
 
class  AverageOutOfROIImageFilter
 
class  BackProjectionImageFilter
 
class  BackwardDifferenceDivergenceImageFilter
 
class  BioscanGeometryReader
 
class  BlockDiagonalMatrixVectorMultiplyImageFilter
 
class  BoellaardScatterCorrectionImageFilter
 
class  BoxShape
 
class  ConditionalMedianImageFilter
 
class  ConjugateGradientConeBeamReconstructionFilter
 
class  ConjugateGradientGetP_kPlusOneImageFilter
 
class  ConjugateGradientGetR_kPlusOneImageFilter
 
class  ConjugateGradientGetX_kPlusOneImageFilter
 
class  ConjugateGradientImageFilter
 
class  ConjugateGradientOperator
 
class  ConstantImageSource
 
class  ConvexShape
 
class  CyclicDeformationImageFilter
 
class  DaubechiesWaveletsConvolutionImageFilter
 
class  DaubechiesWaveletsDenoiseSequenceImageFilter
 
class  DbfField
 
class  DbfFile
 
class  DCMImagXImageIO
 
class  DCMImagXImageIOFactory
 
class  DeconstructImageFilter
 
class  DeconstructSoftThresholdReconstructImageFilter
 
class  DenoisingBPDQImageFilter
 
class  DigisensGeometryReader
 
class  DigisensGeometryXMLFileReader
 
class  DisplacedDetectorForOffsetFieldOfViewImageFilter
 
class  DisplacedDetectorImageFilter
 
class  DivergenceOfGradientConjugateGradientOperator
 
class  DownsampleImageFilter
 
class  DPExtractShroudSignalImageFilter
 
class  DrawBoxImageFilter
 
class  DrawConeImageFilter
 
class  DrawConvexImageFilter
 
class  DrawCylinderImageFilter
 
class  DrawEllipsoidImageFilter
 
class  DrawGeometricPhantomImageFilter
 
class  DrawQuadricImageFilter
 
class  DrawSheppLoganFilter
 
class  DualEnergyNegativeLogLikelihood
 
class  EdfImageIO
 
class  EdfImageIOFactory
 
class  EdfRawToAttenuationImageFilter
 
class  ElektaSynergyGeometryReader
 
class  ElektaSynergyLookupTableImageFilter
 
class  ElektaSynergyRawLookupTableImageFilter
 
class  ElektaXVI5GeometryXMLFileReader
 
class  ExtractPhaseImageFilter
 
class  FDKBackProjectionImageFilter
 
class  FDKConeBeamReconstructionFilter
 
class  FDKWarpBackProjectionImageFilter
 
class  FDKWeightProjectionFilter
 
class  FFTProjectionsConvolutionImageFilter
 
class  FFTRampImageFilter
 
class  FieldOfViewImageFilter
 
class  ForbildPhantomFileReader
 
class  ForwardDifferenceGradientImageFilter
 
class  ForwardProjectionImageFilter
 
class  ForwardWarpImageFilter
 
class  FourDConjugateGradientConeBeamReconstructionFilter
 
class  FourDReconstructionConjugateGradientOperator
 
class  FourDROOSTERConeBeamReconstructionFilter
 
class  FourDSARTConeBeamReconstructionFilter
 
class  FourDToProjectionStackImageFilter
 
class  GeometricPhantom
 
class  GeometricPhantomFileReader
 
class  GetNewtonUpdateImageFilter
 
class  GlobalTimer
 
class  GlobalTimerProbesCollector
 
class  HilbertImageFilter
 
class  HisImageIO
 
class  HisImageIOFactory
 
class  HndImageIO
 
class  HndImageIOFactory
 
class  I0EstimationProjectionFilter
 
class  ImageToVectorImageFilter
 
class  ImagXGeometryReader
 
class  ImagXImageIO
 
class  ImagXImageIOFactory
 
class  ImagXXMLFileReader
 
class  ImportImageFilter
 
class  InterpolatorWithKnownWeightsImageFilter
 
class  IntersectionOfConvexShapes
 
class  IterativeConeBeamReconstructionFilter
 
class  IterativeFDKConeBeamReconstructionFilter
 
class  JosephBackAttenuatedProjectionImageFilter
 
class  JosephBackProjectionImageFilter
 
class  JosephForwardAttenuatedProjectionImageFilter
 
class  JosephForwardProjectionImageFilter
 
class  LagCorrectionImageFilter
 
class  LaplacianImageFilter
 
class  LastDimensionL0GradientDenoisingImageFilter
 
class  LookupTableImageFilter
 
class  LUTbasedVariableI0RawToAttenuationImageFilter
 
class  MagnitudeThresholdImageFilter
 
class  MaskCollimationImageFilter
 
class  MatlabSparseMatrix
 
class  MechlemOneStepSpectralReconstructionFilter
 
class  MotionCompensatedFourDConjugateGradientConeBeamReconstructionFilter
 
class  MotionCompensatedFourDReconstructionConjugateGradientOperator
 
class  MotionCompensatedFourDROOSTERConeBeamReconstructionFilter
 
class  MultiplyByVectorImageFilter
 
class  NesterovUpdateImageFilter
 
class  NormalVariateNoiseFunctor
 
class  OraGeometryReader
 
class  OraImageIO
 
class  OraImageIOFactory
 
class  OraLookupTableImageFilter
 
class  OraXMLFileReader
 
class  OSEMConeBeamReconstructionFilter
 
class  ParkerShortScanImageFilter
 
class  PhaseGatingImageFilter
 
class  PhaseReader
 
class  PhasesToInterpolationWeights
 
class  PolynomialGainCorrectionImageFilter
 
class  ProjectGeometricPhantomImageFilter
 
class  ProjectionGeometry
 
class  ProjectionsDecompositionNegativeLogLikelihood
 
class  ProjectionsReader
 
class  ProjectionsRegionConstIteratorRayBased
 
class  ProjectionsRegionConstIteratorRayBasedParallel
 
class  ProjectionsRegionConstIteratorRayBasedWithCylindricalPanel
 
class  ProjectionsRegionConstIteratorRayBasedWithFlatPanel
 
class  ProjectionStackToFourDImageFilter
 
class  QuadricShape
 
class  RayBoxIntersectionImageFilter
 
class  RayConvexIntersectionImageFilter
 
class  RayEllipsoidIntersectionImageFilter
 
class  RayQuadricIntersectionImageFilter
 
class  ReconstructImageFilter
 
class  ReconstructionConjugateGradientOperator
 
class  Reg1DExtractShroudSignalImageFilter
 
class  Reg23ProjectionGeometry
 
class  RegularizedConjugateGradientConeBeamReconstructionFilter
 
class  ReorderProjectionsImageFilter
 
class  SARTConeBeamReconstructionFilter
 
class  ScatterGlareCorrectionImageFilter
 
class  Schlomka2008NegativeLogLikelihood
 
class  SelectOneProjectionPerCycleImageFilter
 
class  SeparableQuadraticSurrogateRegularizationImageFilter
 
class  SheppLoganPhantom
 
class  SheppLoganPhantomFilter
 
class  SignalToInterpolationWeights
 
class  SimplexSpectralProjectionsDecompositionImageFilter
 
class  SingularValueThresholdImageFilter
 
class  SoftThresholdImageFilter
 
class  SoftThresholdTVImageFilter
 
class  SpectralForwardModelImageFilter
 
class  SplatWithKnownWeightsImageFilter
 
class  SubSelectFromListImageFilter
 
class  SubSelectImageFilter
 
class  SumOfSquaresImageFilter
 
class  ThreeDCircularProjectionGeometry
 
class  ThreeDCircularProjectionGeometryXMLFileWriter
 
class  TimeProbesCollectorBase
 
class  TotalNuclearVariationDenoisingBPDQImageFilter
 
class  TotalVariationDenoiseSequenceImageFilter
 
class  TotalVariationDenoisingBPDQImageFilter
 
class  TotalVariationImageFilter
 
class  UnwarpSequenceConjugateGradientOperator
 
class  UnwarpSequenceImageFilter
 
class  UpsampleImageFilter
 
class  VarianObiGeometryReader
 
class  VarianObiRawImageFilter
 
class  VarianObiXMLFileReader
 
class  VarianProBeamGeometryReader
 
class  VarianProBeamXMLFileReader
 
class  VectorImageToImageFilter
 
class  WarpFourDToProjectionStackImageFilter
 
class  WarpProjectionStackToFourDImageFilter
 
class  WarpSequenceImageFilter
 
class  WatcherForTimer
 
class  WaterPrecorrectionImageFilter
 
class  WeidingerForwardModelImageFilter
 
class  XimImageIO
 
class  XimImageIOFactory
 
class  XRadGeometryReader
 
class  XRadImageIO
 
class  XRadImageIOFactory
 
class  XRadRawToAttenuationImageFilter
 

Functions

template<class TImageType >
itk::Matrix< double, TImageType::ImageDimension+1, TImageType::ImageDimension+1 > GetIndexToPhysicalPointMatrix (const TImageType *image)
 
template<class TImageType >
itk::Matrix< double, TImageType::ImageDimension+1, TImageType::ImageDimension+1 > GetPhysicalPointToIndexMatrix (const TImageType *image)
 
template<class TArgsInfo >
const std::vector< std::string > GetProjectionsFileNamesFromGgo (const TArgsInfo &args_info)
 
static std::vector< double > ReadSignalFile (std::string filename)
 
void RTK_EXPORT RegisterIOFactories ()
 
template<class TArgsInfo , class TIterativeReconstructionFilter >
void SetBackProjectionFromGgo (const TArgsInfo &args_info, TIterativeReconstructionFilter *recon)
 
template<class TConstantImageSourceType , class TArgsInfo >
void SetConstantImageSourceFromGgo (typename TConstantImageSourceType::Pointer source, const TArgsInfo &args_info)
 
template<class TArgsInfo , class TIterativeReconstructionFilter >
void SetForwardProjectionFromGgo (const TArgsInfo &args_info, TIterativeReconstructionFilter *recon)
 
template<class TProjectionsReaderType , class TArgsInfo >
void SetProjectionsReaderFromGgo (typename TProjectionsReaderType::Pointer reader, const TArgsInfo &args_info)
 
template<typename ImageType >
void WriteImage (typename ImageType::ConstPointer input, std::string name)
 

Function Documentation

void RTK_EXPORT rtk::RegisterIOFactories ( )

Register all rtk IO factories.

template<class TProjectionsReaderType , class TArgsInfo >
void rtk::SetProjectionsReaderFromGgo ( typename TProjectionsReaderType::Pointer  reader,
const TArgsInfo &  args_info 
)

Definition at line 179 of file rtkGgoFunctions.h.

References TRY_AND_EXIT_ON_ITK_EXCEPTION.

template<typename ImageType >
void rtk::WriteImage ( typename ImageType::ConstPointer  input,
std::string  name 
)

Definition at line 68 of file rtkGeneralPurposeFunctions.h.